2. Search:

Gene name:

for example: At1g01010

or Function: for example: auxin ( Case sensitive )

within Gene only cDNA only cDNA & T-DNA   T-DNA only SALK GABI FLAG

or cDNA/T-DNA:

for example: SALK_003854, R10047 ...

3. Locate:

Position: chr1 chr2 chr3 chr4 chr5

4. Blast:

Program: blastn, DNAtblastn, Protein

E-value: 1e-201e-101e-040.010.1110

Hits: 15Max

Cut and paste your sequence into here.

File :

5. Multiple Search Search by Gene/Affy/GO/Sequence and plain text return only.


6. SIGnAL iSect Tools to design primers for T-DNA or your sequences, to retrieve sequences and to compare two lists.

ANNOUNCEMENT : **

• We are using AGI pseudo-molecules/annotation (14-May-2003) Now.

• We are now integrating GABI-Kat and FLAGdb T-DNA insertion sequences into our database. For ordering or related information about GABI-Kat and FLAGdb lines, please visit their web sites at FLAGdb or GABI-Kat.

NOTE:

• FAQs about SIGnAL T-DNA project and the T-DNAexpress page.
  
• Interpretations about the window and related popup windows (document format).
  

• Data Release Policy -- Sequenced indexed insertion mutant and cDNA database. Policy on use of preliminary Arabidopsis insertion and cDNA sequence information
  

• Total SALK T-DNA sequences: 134,915 (Jun 27 10:27), FLAGdb FST 13,179 and GABI-Kat FST 31,159 (nr); cDNA clones: Salk, Stanford, PGEC (SSP) full-length cDNAs 21,962 (Updated: Jun. 15, 2003), RIKEN ESTs 20,328, and Arabidopsis research community cDNAs 11,761 collected from GenBank (including Ceres full lengths 4,998 and RIKEN full length 2,055 with GenBank accessions).

• Please contact the Arabidopsis Biological Resource Center (ABRC) to obtain a limited number of seeds for any of the public Salk insertion mutants or SSP U/C clones.
• For Arabidopsis research community cDNAs, please contact individual researchers.
• T-DNA* - T-DNA line deposited to the ABRC;   T-DNA** - T-DNA line not yet deposited. Under most circumstances, seeds for the Salk lines are deposited with the ABRC within 30 - 45 days.

• The Arabidopsis thaliana genome has been sequenced by an international collaboration collectively termed the Arabidopsis Genome Initiative AGI) (The Arabidopsis Genome Initiative, 2000, Nature, 408:796-815). The non-redundant sequence of the chromosomes pseudomolecules) and their annotations were provided to NCBI by TIGR on behalf of the collaborators.